Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRPXP78539 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRPXP78539 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRPXP78539 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SRPXP78539 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRPXP78539 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.51□□□□□ -0.41
SRPXP78539 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRPXP78539 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SRPXP78539 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SRPXP78539 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SRPXP78539 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SRPXP78539 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 ADH5P3-201ENST00000433842 1137 ntBASIC12.5□□□□□ -0.41
SRPXP78539 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 RNA5SP416-201ENST00000516838 111 ntBASIC12.5□□□□□ -0.41
SRPXP78539 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.5□□□□□ -0.41
SRPXP78539 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 AC034105.1-201ENST00000563488 319 ntBASIC12.5□□□□□ -0.41
SRPXP78539 SAMD11P1-201ENST00000571429 661 ntBASIC12.5□□□□□ -0.41
SRPXP78539 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.5□□□□□ -0.41
SRPXP78539 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.5□□□□□ -0.41
SRPXP78539 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SRPXP78539 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRPXP78539 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SRPXP78539 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 AL354702.1-201ENST00000442006 1960 ntBASIC12.49□□□□□ -0.41
SRPXP78539 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.49□□□□□ -0.41
SRPXP78539 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 KRT8P12-202ENST00000472924 1397 ntBASIC12.49□□□□□ -0.41
SRPXP78539 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.49□□□□□ -0.41
SRPXP78539 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SRPXP78539 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms