Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.28□□□□□ -0.28
DEFA3P59666 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA3P59666 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA3P59666 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.27□□□□□ -0.28
DEFA3P59666 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
DEFA3P59666 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.27□□□□□ -0.28
DEFA3P59666 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.27□□□□□ -0.28
DEFA3P59666 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
DEFA3P59666 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
DEFA3P59666 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.27□□□□□ -0.28
DEFA3P59666 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.27□□□□□ -0.28
DEFA3P59666 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 AP002761.4-201ENST00000565433 3361 ntBASIC13.27□□□□□ -0.28
DEFA3P59666 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.27□□□□□ -0.28
DEFA3P59666 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA3P59666 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA3P59666 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.27□□□□□ -0.29
DEFA3P59666 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.27□□□□□ -0.29
DEFA3P59666 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA3P59666 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
DEFA3P59666 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 AC139887.4-201ENST00000607877 719 ntBASIC13.27□□□□□ -0.29
DEFA3P59666 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 PMS2P7-201ENST00000506558 1336 ntBASIC13.27□□□□□ -0.29
DEFA3P59666 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
DEFA3P59666 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
DEFA3P59666 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
DEFA3P59666 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
DEFA3P59666 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
DEFA3P59666 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA3P59666 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
DEFA3P59666 AC111170.3-201ENST00000624282 2464 ntBASIC13.27□□□□□ -0.29
DEFA3P59666 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA3P59666 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA3P59666 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA3P59666 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA3P59666 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
DEFA3P59666 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA3P59666 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA3P59666 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
DEFA3P59666 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
DEFA3P59666 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA3P59666 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.26□□□□□ -0.29
DEFA3P59666 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA3P59666 PHKG1P2-201ENST00000457537 863 ntBASIC13.26□□□□□ -0.29
DEFA3P59666 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.26□□□□□ -0.29
DEFA3P59666 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms