Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.49□□□□□ -0.25
GFRA1P56159 RN7SL219P-201ENST00000582872 296 ntBASIC13.49□□□□□ -0.25
GFRA1P56159 AC244157.2-201ENST00000616239 1006 ntBASIC13.49□□□□□ -0.25
GFRA1P56159 MIR6869-201ENST00000619434 62 ntBASIC13.49□□□□□ -0.25
GFRA1P56159 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.49□□□□□ -0.25
GFRA1P56159 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.49□□□□□ -0.25
GFRA1P56159 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GFRA1P56159 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.49□□□□□ -0.25
GFRA1P56159 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.49□□□□□ -0.25
GFRA1P56159 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
GFRA1P56159 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 AC009093.2-202ENST00000620513 2079 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.48□□□□□ -0.25
GFRA1P56159 BTBD6P1-201ENST00000412176 1267 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.48□□□□□ -0.25
GFRA1P56159 HIST2H2BB-201ENST00000449108 381 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 PFN1P12-201ENST00000455938 534 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 AC108725.1-201ENST00000495472 409 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 RN7SL371P-201ENST00000578099 267 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 MIR4683-201ENST00000579659 81 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 MIR4538-201ENST00000581377 78 ntBASIC13.48□□□□□ -0.25
GFRA1P56159 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.48□□□□□ -0.25
GFRA1P56159 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.48□□□□□ -0.25
GFRA1P56159 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GFRA1P56159 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.47□□□□□ -0.25
GFRA1P56159 AL136379.1-201ENST00000623471 2642 ntBASIC13.47□□□□□ -0.25
GFRA1P56159 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GFRA1P56159 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GFRA1P56159 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.47□□□□□ -0.25
GFRA1P56159 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.47□□□□□ -0.25
GFRA1P56159 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GFRA1P56159 AL591846.1-201ENST00000451736 433 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 433 ms