Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 KRT43P-201ENST00000434019 910 ntBASIC15.62■□□□□ 0.09
NEK3P51956 AC234783.1-201ENST00000441761 496 ntBASIC15.62■□□□□ 0.09
NEK3P51956 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 USP32P1-208ENST00000506594 1164 ntBASIC15.62■□□□□ 0.09
NEK3P51956 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.62■□□□□ 0.09
NEK3P51956 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.62■□□□□ 0.09
NEK3P51956 AC009486.1-201ENST00000569860 813 ntBASIC15.62■□□□□ 0.09
NEK3P51956 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 BTNL10-201ENST00000595971 695 ntBASIC15.62■□□□□ 0.09
NEK3P51956 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NEK3P51956 AC233724.13-201ENST00000598383 410 ntBASIC15.62■□□□□ 0.09
NEK3P51956 AC093813.1-201ENST00000605066 256 ntBASIC15.62■□□□□ 0.09
NEK3P51956 AC017083.2-201ENST00000608069 979 ntBASIC15.62■□□□□ 0.09
NEK3P51956 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.62■□□□□ 0.09
NEK3P51956 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.62■□□□□ 0.09
NEK3P51956 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 AL137784.3-201ENST00000623858 2288 ntBASIC15.61■□□□□ 0.09
NEK3P51956 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NEK3P51956 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.61■□□□□ 0.09
NEK3P51956 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.61■□□□□ 0.09
NEK3P51956 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.61■□□□□ 0.09
NEK3P51956 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.61■□□□□ 0.09
NEK3P51956 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.61■□□□□ 0.09
NEK3P51956 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.61■□□□□ 0.09
NEK3P51956 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.61■□□□□ 0.09
NEK3P51956 PTP4A1P2-201ENST00000546033 454 ntBASIC15.61■□□□□ 0.09
NEK3P51956 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.61■□□□□ 0.09
NEK3P51956 AL008721.1-201ENST00000609964 604 ntBASIC15.61■□□□□ 0.09
NEK3P51956 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.61■□□□□ 0.09
NEK3P51956 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NEK3P51956 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.61■□□□□ 0.09
NEK3P51956 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NEK3P51956 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.6■□□□□ 0.09
NEK3P51956 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 AC117489.1-201ENST00000625169 3217 ntBASIC15.6■□□□□ 0.09
NEK3P51956 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NEK3P51956 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
NEK3P51956 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 C8orf49-201ENST00000525043 1968 ntBASIC15.6■□□□□ 0.09
NEK3P51956 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.6■□□□□ 0.09
NEK3P51956 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NEK3P51956 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NEK3P51956 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms