Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
BRCA2P51587 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
BRCA2P51587 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.39■□□□□ 0.22
BRCA2P51587 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
BRCA2P51587 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.39■□□□□ 0.22
BRCA2P51587 MIR1301-201ENST00000408518 82 ntBASIC16.39■□□□□ 0.22
BRCA2P51587 AC010900.1-201ENST00000449849 1296 ntBASIC16.39■□□□□ 0.22
BRCA2P51587 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.39■□□□□ 0.22
BRCA2P51587 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.39■□□□□ 0.22
BRCA2P51587 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 WASH7P-201ENST00000488147 1351 ntBASIC16.39■□□□□ 0.21
BRCA2P51587 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCA2P51587 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCA2P51587 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 AC142086.5-202ENST00000562500 217 ntBASIC16.39■□□□□ 0.21
BRCA2P51587 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.39■□□□□ 0.21
BRCA2P51587 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
BRCA2P51587 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.39■□□□□ 0.21
BRCA2P51587 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 ACTG1P19-201ENST00000418987 1116 ntBASIC16.39■□□□□ 0.21
BRCA2P51587 AC083801.1-201ENST00000491689 358 ntBASIC16.39■□□□□ 0.21
BRCA2P51587 AC114947.1-202ENST00000514136 344 ntBASIC16.39■□□□□ 0.21
BRCA2P51587 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.39■□□□□ 0.21
BRCA2P51587 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.39■□□□□ 0.21
BRCA2P51587 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.39■□□□□ 0.21
BRCA2P51587 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.39■□□□□ 0.21
BRCA2P51587 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BRCA2P51587 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
BRCA2P51587 PTGER4P2-201ENST00000328411 252 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 PTGER4P3-201ENST00000458150 252 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 AC023906.1-201ENST00000486386 453 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 IGHEP2-201ENST00000519308 1256 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 NAV1-210ENST00000593583 726 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 PYY2-201ENST00000315776 282 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
BRCA2P51587 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
BRCA2P51587 AF274858.1-201ENST00000406288 372 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.38■□□□□ 0.21
BRCA2P51587 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 AC092862.1-201ENST00000541534 533 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 AC008825.2-201ENST00000603374 718 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
BRCA2P51587 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
BRCA2P51587 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 AC021305.1-201ENST00000520656 1514 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRCA2P51587 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
BRCA2P51587 AL929302.1-201ENST00000426556 871 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.38■□□□□ 0.21
BRCA2P51587 IGHV1-12-201ENST00000518307 205 ntBASIC16.38■□□□□ 0.21
BRCA2P51587 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms