Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF144AP50876 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 AL096865.1-201ENST00000606796 927 ntBASIC14.13□□□□□ -0.15
RNF144AP50876 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 AC008761.3-201ENST00000624803 892 ntBASIC14.13□□□□□ -0.15
RNF144AP50876 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RNF144AP50876 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
RNF144AP50876 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RNF144AP50876 AC018529.2-202ENST00000611482 3087 ntBASIC14.13□□□□□ -0.15
RNF144AP50876 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF144AP50876 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF144AP50876 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
RNF144AP50876 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF144AP50876 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF144AP50876 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF144AP50876 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.12□□□□□ -0.15
RNF144AP50876 AC055876.2-201ENST00000531834 546 ntBASIC14.12□□□□□ -0.15
RNF144AP50876 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 AL390728.6-201ENST00000566446 1246 ntBASIC14.12□□□□□ -0.15
RNF144AP50876 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 AC009118.2-201ENST00000613275 655 ntBASIC14.12□□□□□ -0.15
RNF144AP50876 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 DRD5P1-201ENST00000456605 1438 ntBASIC14.12□□□□□ -0.15
RNF144AP50876 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF144AP50876 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF144AP50876 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.12□□□□□ -0.15
RNF144AP50876 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF144AP50876 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
RNF144AP50876 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF144AP50876 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF144AP50876 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms