Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 MYCLP2-201ENST00000449268 967 ntBASIC15.74■□□□□ 0.11
MMP13P45452 VDAC1P7-201ENST00000462417 847 ntBASIC15.74■□□□□ 0.11
MMP13P45452 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.74■□□□□ 0.11
MMP13P45452 AC140912.1-201ENST00000577171 1054 ntBASIC15.74■□□□□ 0.11
MMP13P45452 BRI3BPP1-201ENST00000594224 787 ntBASIC15.74■□□□□ 0.11
MMP13P45452 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MMP13P45452 AL662799.1-202ENST00000614205 422 ntBASIC15.74■□□□□ 0.11
MMP13P45452 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP13P45452 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP13P45452 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP13P45452 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP13P45452 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP13P45452 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP13P45452 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 AC018529.2-202ENST00000611482 3087 ntBASIC15.73■□□□□ 0.11
MMP13P45452 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MMP13P45452 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MMP13P45452 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MMP13P45452 AC098850.1-201ENST00000419919 790 ntBASIC15.73■□□□□ 0.11
MMP13P45452 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP13P45452 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP13P45452 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.73■□□□□ 0.11
MMP13P45452 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP13P45452 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP13P45452 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP13P45452 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
MMP13P45452 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP13P45452 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP13P45452 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 DRD5P1-201ENST00000456605 1438 ntBASIC15.73■□□□□ 0.11
MMP13P45452 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MMP13P45452 AC152010.1-201ENST00000415779 2006 ntBASIC15.73■□□□□ 0.11
MMP13P45452 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP13P45452 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP13P45452 OR2I1P-210ENST00000642037 4691 ntBASIC15.73■□□□□ 0.11
MMP13P45452 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP13P45452 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP13P45452 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 INTS4P2-202ENST00000614726 2019 ntBASIC15.72■□□□□ 0.11
MMP13P45452 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 GAPDHP40-201ENST00000505218 1006 ntBASIC15.72■□□□□ 0.11
MMP13P45452 AC026410.3-201ENST00000514280 936 ntBASIC15.72■□□□□ 0.11
MMP13P45452 AC092552.1-201ENST00000547243 906 ntBASIC15.72■□□□□ 0.11
MMP13P45452 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP13P45452 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.72■□□□□ 0.11
MMP13P45452 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.72■□□□□ 0.11
MMP13P45452 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP13P45452 AC138761.1-201ENST00000584393 385 ntBASIC15.72■□□□□ 0.11
MMP13P45452 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.72■□□□□ 0.11
MMP13P45452 AC008494.3-201ENST00000606615 944 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms