Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
USP8P40818 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
USP8P40818 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USP8P40818 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.57■□□□□ 0.24
USP8P40818 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.57■□□□□ 0.24
USP8P40818 DOC2GP-202ENST00000514950 1163 ntBASIC16.57■□□□□ 0.24
USP8P40818 TPRX2P-201ENST00000535362 881 ntBASIC16.57■□□□□ 0.24
USP8P40818 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
USP8P40818 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.57■□□□□ 0.24
USP8P40818 AC027796.2-201ENST00000575326 344 ntBASIC16.57■□□□□ 0.24
USP8P40818 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.57■□□□□ 0.24
USP8P40818 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
USP8P40818 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 AP000845.1-201ENST00000581677 2131 ntBASIC16.57■□□□□ 0.24
USP8P40818 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
USP8P40818 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USP8P40818 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
USP8P40818 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 SPDYE19P-201ENST00000338590 713 ntBASIC16.56■□□□□ 0.24
USP8P40818 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.56■□□□□ 0.24
USP8P40818 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 GNAQP1-201ENST00000444815 1067 ntBASIC16.56■□□□□ 0.24
USP8P40818 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 RNA5SP421-201ENST00000516864 134 ntBASIC16.56■□□□□ 0.24
USP8P40818 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.56■□□□□ 0.24
USP8P40818 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.56■□□□□ 0.24
USP8P40818 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.56■□□□□ 0.24
USP8P40818 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP8P40818 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP8P40818 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.55■□□□□ 0.24
USP8P40818 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.55■□□□□ 0.24
USP8P40818 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 GHSR-202ENST00000427970 912 ntBASIC16.55■□□□□ 0.24
USP8P40818 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.55■□□□□ 0.24
USP8P40818 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
USP8P40818 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.55■□□□□ 0.24
USP8P40818 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.55■□□□□ 0.24
USP8P40818 AC004790.1-201ENST00000612686 536 ntBASIC16.55■□□□□ 0.24
USP8P40818 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
USP8P40818 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.55■□□□□ 0.24
USP8P40818 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 REXO1L2P-201ENST00000425429 2069 ntBASIC16.55■□□□□ 0.24
USP8P40818 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 AJ011931.1-201ENST00000618749 2492 ntBASIC16.55■□□□□ 0.24
USP8P40818 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms