Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 AC006058.4-201ENST00000624016 1670 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CEACAM3P40198 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.38□□□□□ -0.43
CEACAM3P40198 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CEACAM3P40198 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
CEACAM3P40198 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
CEACAM3P40198 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.38□□□□□ -0.43
CEACAM3P40198 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.38□□□□□ -0.43
CEACAM3P40198 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.38□□□□□ -0.43
CEACAM3P40198 AC022616.1-201ENST00000518688 554 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.38□□□□□ -0.43
CEACAM3P40198 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.38□□□□□ -0.43
CEACAM3P40198 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 CR383656.12-201ENST00000549567 513 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 AC005225.4-201ENST00000557330 545 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 AC010319.3-201ENST00000597028 470 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 LINC02084-201ENST00000606069 1096 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 AC105233.6-201ENST00000642093 218 ntBASIC12.38□□□□□ -0.43
CEACAM3P40198 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CEACAM3P40198 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.38□□□□□ -0.43
CEACAM3P40198 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CEACAM3P40198 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.38□□□□□ -0.43
CEACAM3P40198 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CEACAM3P40198 AL360270.3-201ENST00000609118 1348 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 KRT8P14-201ENST00000414254 1442 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms