Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 LINC00552-201ENST00000625151 2579 ntBASIC15.97■□□□□ 0.15
RFC1P35251 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFC1P35251 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC1P35251 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC1P35251 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RFC1P35251 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RFC1P35251 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC1P35251 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC1P35251 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RFC1P35251 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 DGCR5-201ENST00000399539 862 ntBASIC15.96■□□□□ 0.15
RFC1P35251 AL139094.1-201ENST00000405549 1188 ntBASIC15.96■□□□□ 0.15
RFC1P35251 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RFC1P35251 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RFC1P35251 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.96■□□□□ 0.15
RFC1P35251 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.96■□□□□ 0.15
RFC1P35251 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.96■□□□□ 0.15
RFC1P35251 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC1P35251 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC1P35251 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFC1P35251 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC1P35251 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC1P35251 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RFC1P35251 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC1P35251 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC1P35251 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.96■□□□□ 0.14
RFC1P35251 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.95■□□□□ 0.14
RFC1P35251 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RFC1P35251 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 AC018442.1-201ENST00000421439 2061 ntBASIC15.95■□□□□ 0.14
RFC1P35251 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 RNU1-114P-201ENST00000365297 166 ntBASIC15.95■□□□□ 0.14
RFC1P35251 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.95■□□□□ 0.14
RFC1P35251 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.95■□□□□ 0.14
RFC1P35251 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RFC1P35251 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.95■□□□□ 0.14
RFC1P35251 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.95■□□□□ 0.14
RFC1P35251 MTHFR-210ENST00000641407 2387 ntBASIC15.95■□□□□ 0.14
RFC1P35251 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.95■□□□□ 0.14
RFC1P35251 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFC1P35251 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFC1P35251 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RFC1P35251 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.95■□□□□ 0.14
RFC1P35251 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms