Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AP003398.1-201ENST00000531124 318 ntBASIC18.73■□□□□ 0.59
RFC4P35249 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 MIR3188-201ENST00000583494 85 ntBASIC18.73■□□□□ 0.59
RFC4P35249 AL132780.4-201ENST00000624870 1135 ntBASIC18.73■□□□□ 0.59
RFC4P35249 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RFC4P35249 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.73■□□□□ 0.59
RFC4P35249 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.73■□□□□ 0.59
RFC4P35249 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFC4P35249 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC4P35249 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RFC4P35249 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.72■□□□□ 0.59
RFC4P35249 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC4P35249 AL807761.2-201ENST00000422849 729 ntBASIC18.72■□□□□ 0.59
RFC4P35249 RPSAP15-201ENST00000448168 861 ntBASIC18.72■□□□□ 0.59
RFC4P35249 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 DUTP3-201ENST00000450025 415 ntBASIC18.72■□□□□ 0.59
RFC4P35249 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC4P35249 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFC4P35249 NDUFS6P1-201ENST00000485187 316 ntBASIC18.72■□□□□ 0.59
RFC4P35249 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC4P35249 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.72■□□□□ 0.59
RFC4P35249 AC092299.1-201ENST00000632679 757 ntBASIC18.72■□□□□ 0.59
RFC4P35249 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC4P35249 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC4P35249 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC4P35249 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFC4P35249 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFC4P35249 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC4P35249 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RFC4P35249 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFC4P35249 LILRP1-201ENST00000444199 1370 ntBASIC18.71■□□□□ 0.59
RFC4P35249 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RFC4P35249 AC007326.1-201ENST00000604539 458 ntBASIC18.71■□□□□ 0.59
RFC4P35249 AC127024.7-201ENST00000625101 200 ntBASIC18.71■□□□□ 0.59
RFC4P35249 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC4P35249 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFC4P35249 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC4P35249 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC4P35249 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFC4P35249 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.71■□□□□ 0.58
RFC4P35249 AC099398.1-201ENST00000567919 2776 ntBASIC18.7■□□□□ 0.58
RFC4P35249 ZBED1P1-201ENST00000502364 1930 ntBASIC18.7■□□□□ 0.58
RFC4P35249 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC4P35249 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC4P35249 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RFC4P35249 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RFC4P35249 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 MIR1227-201ENST00000408484 88 ntBASIC18.7■□□□□ 0.58
RFC4P35249 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC4P35249 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC4P35249 XBP1P1-201ENST00000436573 652 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms