Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 BANF1P3-201ENST00000412556 261 ntBASIC19.97■□□□□ 0.79
USP6P35125 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.97■□□□□ 0.79
USP6P35125 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.97■□□□□ 0.79
USP6P35125 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.97■□□□□ 0.79
USP6P35125 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.97■□□□□ 0.79
USP6P35125 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP6P35125 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP6P35125 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.97■□□□□ 0.79
USP6P35125 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP6P35125 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
USP6P35125 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.97■□□□□ 0.79
USP6P35125 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP6P35125 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
USP6P35125 CICP23-201ENST00000605013 2741 ntBASIC19.96■□□□□ 0.79
USP6P35125 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP6P35125 AL162727.3-201ENST00000635661 2787 ntBASIC19.96■□□□□ 0.79
USP6P35125 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.96■□□□□ 0.79
USP6P35125 KHSRPP1-201ENST00000427983 1768 ntBASIC19.96■□□□□ 0.79
USP6P35125 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.96■□□□□ 0.79
USP6P35125 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.96■□□□□ 0.79
USP6P35125 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USP6P35125 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 AL355334.1-201ENST00000417713 215 ntBASIC19.96■□□□□ 0.79
USP6P35125 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.96■□□□□ 0.79
USP6P35125 RPL18AP3-201ENST00000462885 528 ntBASIC19.96■□□□□ 0.79
USP6P35125 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.96■□□□□ 0.79
USP6P35125 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.96■□□□□ 0.79
USP6P35125 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP6P35125 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.96■□□□□ 0.79
USP6P35125 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.96■□□□□ 0.79
USP6P35125 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP6P35125 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
USP6P35125 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.95■□□□□ 0.78
USP6P35125 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
USP6P35125 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.95■□□□□ 0.78
USP6P35125 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.95■□□□□ 0.78
USP6P35125 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.95■□□□□ 0.78
USP6P35125 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.95■□□□□ 0.78
USP6P35125 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 FTH1P22-201ENST00000456305 520 ntBASIC19.95■□□□□ 0.78
USP6P35125 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 TMCO5B-205ENST00000530020 894 ntBASIC19.95■□□□□ 0.78
USP6P35125 AC093752.3-201ENST00000567343 901 ntBASIC19.95■□□□□ 0.78
USP6P35125 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
USP6P35125 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP6P35125 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.95■□□□□ 0.78
USP6P35125 KRT18P9-201ENST00000604826 1300 ntBASIC19.95■□□□□ 0.78
USP6P35125 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
USP6P35125 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP6P35125 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP6P35125 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
USP6P35125 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.94■□□□□ 0.78
USP6P35125 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.94■□□□□ 0.78
USP6P35125 ST13P19-201ENST00000442505 1124 ntBASIC19.94■□□□□ 0.78
USP6P35125 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.94■□□□□ 0.78
USP6P35125 SIGLEC18P-201ENST00000602271 909 ntBASIC19.94■□□□□ 0.78
USP6P35125 AC084781.1-201ENST00000613737 656 ntBASIC19.94■□□□□ 0.78
USP6P35125 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.94■□□□□ 0.78
USP6P35125 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms