Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 CAP2P1-201ENST00000557743 1390 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 MIR557-201ENST00000385239 98 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 TSPY25P-201ENST00000429463 745 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
HOXC8P31273 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXC8P31273 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXC8P31273 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
HOXC8P31273 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 AC103810.10-201ENST00000606504 343 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 AP003419.4-201ENST00000616071 517 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 AC007718.1-201ENST00000621078 280 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXC8P31273 AL805961.1-201ENST00000642026 753 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HOXC8P31273 AC015909.3-201ENST00000572855 1794 ntBASIC16.18■□□□□ 0.18
HOXC8P31273 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.18■□□□□ 0.18
HOXC8P31273 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HOXC8P31273 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC8P31273 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC8P31273 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HOXC8P31273 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXC8P31273 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC8P31273 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC8P31273 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXC8P31273 AC008723.1-201ENST00000506922 207 ntBASIC16.17■□□□□ 0.18
HOXC8P31273 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.17■□□□□ 0.18
HOXC8P31273 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXC8P31273 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.17■□□□□ 0.18
HOXC8P31273 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 LINC01783-202ENST00000614408 828 ntBASIC16.17■□□□□ 0.18
HOXC8P31273 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.17■□□□□ 0.18
HOXC8P31273 BX284668.2-205ENST00000619677 828 ntBASIC16.17■□□□□ 0.18
HOXC8P31273 AC011491.1-203ENST00000637688 543 ntBASIC16.17■□□□□ 0.18
HOXC8P31273 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HOXC8P31273 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.17■□□□□ 0.18
HOXC8P31273 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HOXC8P31273 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 PPT1-215ENST00000641471 2368 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 AL136172.1-201ENST00000598590 1394 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 RPSAP31-201ENST00000416648 895 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXC8P31273 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 AC092171.5-201ENST00000608012 942 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 MIR7845-201ENST00000618396 99 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 COX6A1P2-201ENST00000620597 330 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 KRT8P31-201ENST00000504812 1408 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms