Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.97□□□□□ -0.01
VARSP26640 U91328.1-201ENST00000437528 223 ntBASIC14.97□□□□□ -0.01
VARSP26640 DOC2GP-202ENST00000514950 1163 ntBASIC14.97□□□□□ -0.01
VARSP26640 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.97□□□□□ -0.01
VARSP26640 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 MIR6805-201ENST00000615055 62 ntBASIC14.97□□□□□ -0.01
VARSP26640 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.97□□□□□ -0.01
VARSP26640 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VARSP26640 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VARSP26640 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 CLK3P2-201ENST00000427566 1453 ntBASIC14.96□□□□□ -0.01
VARSP26640 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.96□□□□□ -0.01
VARSP26640 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 SPDYE19P-201ENST00000338590 713 ntBASIC14.96□□□□□ -0.01
VARSP26640 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.96□□□□□ -0.01
VARSP26640 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.96□□□□□ -0.01
VARSP26640 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.96□□□□□ -0.01
VARSP26640 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VARSP26640 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 AL512384.1-201ENST00000406683 331 ntBASIC14.96□□□□□ -0.01
VARSP26640 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.96□□□□□ -0.01
VARSP26640 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.96□□□□□ -0.01
VARSP26640 API5-211ENST00000534695 560 ntTSL 5 BASIC14.96□□□□□ -0.01
VARSP26640 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.96□□□□□ -0.01
VARSP26640 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VARSP26640 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.96□□□□□ -0.01
VARSP26640 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARSP26640 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VARSP26640 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.96□□□□□ -0.02
VARSP26640 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.96□□□□□ -0.02
VARSP26640 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARSP26640 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARSP26640 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARSP26640 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
VARSP26640 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
VARSP26640 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms