Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRM3P20309 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRM3P20309 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CHRM3P20309 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRM3P20309 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRM3P20309 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRM3P20309 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CHRM3P20309 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRM3P20309 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 C1QBPP1-201ENST00000400117 770 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 AC002472.2-201ENST00000442739 958 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 MYCLP2-201ENST00000449268 967 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRM3P20309 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRM3P20309 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRM3P20309 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 AC120045.2-201ENST00000567334 178 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 MIR4745-201ENST00000577608 62 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 CHCHD2P3-201ENST00000603038 451 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 INTS4P1-203ENST00000641008 3683 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 AC093525.8-201ENST00000624099 1342 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRM3P20309 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 AC232323.1-201ENST00000540724 2099 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 LILRP1-201ENST00000444199 1370 ntBASIC15.1■□□□□ 0.01
CHRM3P20309 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CHRM3P20309 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRM3P20309 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CHRM3P20309 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.09■□□□□ 0.01
CHRM3P20309 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 AL390755.1-201ENST00000623716 2027 ntBASIC15.09■□□□□ 0.01
CHRM3P20309 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRM3P20309 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRM3P20309 MIR661-201ENST00000384842 89 ntBASIC15.09■□□□□ 0.01
CHRM3P20309 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRM3P20309 AL442647.2-201ENST00000429864 857 ntBASIC15.09■□□□□ 0.01
CHRM3P20309 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRM3P20309 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRM3P20309 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRM3P20309 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.09■□□□□ 0.01
CHRM3P20309 AC092552.1-201ENST00000547243 906 ntBASIC15.09■□□□□ 0.01
CHRM3P20309 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRM3P20309 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRM3P20309 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRM3P20309 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRM3P20309 BX539320.1-201ENST00000623759 877 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms