Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KRT4P19013 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
KRT4P19013 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT4P19013 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT4P19013 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT4P19013 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT4P19013 RBPMS2P1-201ENST00000437762 623 ntBASIC15.22■□□□□ 0.03
KRT4P19013 SPDYE14P-201ENST00000442619 822 ntBASIC15.22■□□□□ 0.03
KRT4P19013 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT4P19013 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT4P19013 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.22■□□□□ 0.03
KRT4P19013 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
KRT4P19013 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 AC018665.1-201ENST00000622927 1362 ntBASIC15.22■□□□□ 0.03
KRT4P19013 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT4P19013 AC005252.3-201ENST00000623855 2258 ntBASIC15.22■□□□□ 0.03
KRT4P19013 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 AC107918.4-201ENST00000641966 3141 ntBASIC15.21■□□□□ 0.03
KRT4P19013 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 AL627223.1-201ENST00000416693 442 ntBASIC15.21■□□□□ 0.03
KRT4P19013 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 GPS2P2-201ENST00000430745 888 ntBASIC15.21■□□□□ 0.03
KRT4P19013 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 ALG1L5P-201ENST00000482043 771 ntBASIC15.21■□□□□ 0.03
KRT4P19013 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.21■□□□□ 0.03
KRT4P19013 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT4P19013 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT4P19013 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT4P19013 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 AC093520.2-201ENST00000561830 333 ntBASIC15.21■□□□□ 0.03
KRT4P19013 LINC01115-203ENST00000606068 577 ntBASIC15.21■□□□□ 0.03
KRT4P19013 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT4P19013 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT4P19013 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT4P19013 AL033527.5-202ENST00000641632 1098 ntBASIC15.21■□□□□ 0.03
KRT4P19013 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
KRT4P19013 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT4P19013 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT4P19013 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.21■□□□□ 0.02
KRT4P19013 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT4P19013 ELL2P1-201ENST00000413990 1906 ntBASIC15.21■□□□□ 0.02
KRT4P19013 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT4P19013 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT4P19013 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.21■□□□□ 0.02
KRT4P19013 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT4P19013 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT4P19013 AC126335.2-201ENST00000623362 4637 ntBASIC15.21■□□□□ 0.02
KRT4P19013 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
KRT4P19013 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT4P19013 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
KRT4P19013 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT4P19013 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms