Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ATF3P18847 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATF3P18847 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATF3P18847 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.32■□□□□ 0.84
ATF3P18847 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATF3P18847 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.32■□□□□ 0.84
ATF3P18847 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF3P18847 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 RN7SL494P-201ENST00000461517 304 ntBASIC20.32■□□□□ 0.84
ATF3P18847 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF3P18847 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 AC068867.1-201ENST00000559855 150 ntBASIC20.32■□□□□ 0.84
ATF3P18847 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.32■□□□□ 0.84
ATF3P18847 AC006548.2-201ENST00000605217 529 ntBASIC20.32■□□□□ 0.84
ATF3P18847 AC007250.1-201ENST00000608934 338 ntBASIC20.32■□□□□ 0.84
ATF3P18847 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF3P18847 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ATF3P18847 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.32■□□□□ 0.84
ATF3P18847 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 AC007292.2-201ENST00000593524 1812 ntBASIC20.32■□□□□ 0.84
ATF3P18847 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 AC080080.1-201ENST00000625121 2420 ntBASIC20.32■□□□□ 0.84
ATF3P18847 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATF3P18847 REXO1L2P-201ENST00000425429 2069 ntBASIC20.31■□□□□ 0.84
ATF3P18847 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATF3P18847 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF3P18847 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATF3P18847 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.31■□□□□ 0.84
ATF3P18847 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 AC027139.1-201ENST00000565286 951 ntBASIC20.31■□□□□ 0.84
ATF3P18847 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATF3P18847 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATF3P18847 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
ATF3P18847 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 LILRP1-201ENST00000444199 1370 ntBASIC20.31■□□□□ 0.84
ATF3P18847 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.31■□□□□ 0.84
ATF3P18847 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATF3P18847 CTBP2P8-201ENST00000422584 1330 ntBASIC20.3■□□□□ 0.84
ATF3P18847 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.3■□□□□ 0.84
ATF3P18847 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 RPL18AP8-201ENST00000486071 528 ntBASIC20.3■□□□□ 0.84
ATF3P18847 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.3■□□□□ 0.84
ATF3P18847 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ATF3P18847 AL139339.2-201ENST00000608063 657 ntBASIC20.3■□□□□ 0.84
ATF3P18847 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC20.3■□□□□ 0.84
ATF3P18847 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ATF3P18847 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATF3P18847 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATF3P18847 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms