Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMPD1P17405 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMPD1P17405 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMPD1P17405 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMPD1P17405 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SMPD1P17405 OR2K2-202ENST00000374428 1038 ntBASIC16.6■□□□□ 0.25
SMPD1P17405 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.6■□□□□ 0.25
SMPD1P17405 RPL17P11-201ENST00000417593 544 ntBASIC16.6■□□□□ 0.25
SMPD1P17405 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.6■□□□□ 0.25
SMPD1P17405 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.6■□□□□ 0.25
SMPD1P17405 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.6■□□□□ 0.25
SMPD1P17405 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.6■□□□□ 0.25
SMPD1P17405 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 MEG3_2.1-201ENST00000611456 105 ntBASIC16.6■□□□□ 0.25
SMPD1P17405 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.6■□□□□ 0.25
SMPD1P17405 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.6■□□□□ 0.25
SMPD1P17405 AC007718.1-201ENST00000621078 280 ntBASIC16.6■□□□□ 0.25
SMPD1P17405 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.6■□□□□ 0.25
SMPD1P17405 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMPD1P17405 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SMPD1P17405 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMPD1P17405 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.59■□□□□ 0.25
SMPD1P17405 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.59■□□□□ 0.25
SMPD1P17405 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 AL035414.1-201ENST00000451327 857 ntBASIC16.59■□□□□ 0.25
SMPD1P17405 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.59■□□□□ 0.25
SMPD1P17405 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 AC026803.1-201ENST00000569130 274 ntBASIC16.59■□□□□ 0.25
SMPD1P17405 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.59■□□□□ 0.25
SMPD1P17405 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.59■□□□□ 0.25
SMPD1P17405 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 SSR4P1-203ENST00000599569 2260 ntBASIC16.59■□□□□ 0.25
SMPD1P17405 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMPD1P17405 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SMPD1P17405 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMPD1P17405 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SMPD1P17405 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.58■□□□□ 0.25
SMPD1P17405 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.58■□□□□ 0.25
SMPD1P17405 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SMPD1P17405 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.58■□□□□ 0.25
SMPD1P17405 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMPD1P17405 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMPD1P17405 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMPD1P17405 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SMPD1P17405 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMPD1P17405 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMPD1P17405 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms