Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 AL137784.3-201ENST00000623858 2288 ntBASIC15.25■□□□□ 0.03
THRAP10827 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
THRAP10827 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THRAP10827 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
THRAP10827 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
THRAP10827 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 MIR6805-201ENST00000615055 62 ntBASIC15.24■□□□□ 0.03
THRAP10827 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
THRAP10827 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
THRAP10827 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.24■□□□□ 0.03
THRAP10827 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THRAP10827 WASH3P-207ENST00000560956 1394 ntBASIC15.24■□□□□ 0.03
THRAP10827 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
THRAP10827 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.23■□□□□ 0.03
THRAP10827 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 MIR1909-201ENST00000411312 80 ntBASIC15.23■□□□□ 0.03
THRAP10827 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
THRAP10827 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.23■□□□□ 0.03
THRAP10827 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.23■□□□□ 0.03
THRAP10827 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.23■□□□□ 0.03
THRAP10827 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.23■□□□□ 0.03
THRAP10827 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.23■□□□□ 0.03
THRAP10827 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.23■□□□□ 0.03
THRAP10827 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.23■□□□□ 0.03
THRAP10827 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.23■□□□□ 0.03
THRAP10827 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
THRAP10827 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms