Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40ALP0C0E4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 CALR4P-201ENST00000431943 946 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 FTLP10-202ENST00000505798 471 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 PPY2P-201ENST00000582808 702 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 OR10B1P-201ENST00000601666 907 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 AC020658.6-201ENST00000623564 1870 ntBASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40ALP0C0E4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AC092127.1-201ENST00000567093 3455 ntBASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40ALP0C0E4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms