Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC105206.1-202ENST00000314927 2368 ntBASIC17.01■□□□□ 0.31
TPM3P06753 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TPM3P06753 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 MED15P5-201ENST00000423150 992 ntBASIC17.01■□□□□ 0.31
TPM3P06753 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 ACTG1P14-201ENST00000446382 1122 ntBASIC17.01■□□□□ 0.31
TPM3P06753 KRT18P3-201ENST00000451602 1288 ntBASIC17.01■□□□□ 0.31
TPM3P06753 TIMM8BP1-201ENST00000452384 211 ntBASIC17.01■□□□□ 0.31
TPM3P06753 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 AC027601.4-201ENST00000611259 610 ntBASIC17.01■□□□□ 0.31
TPM3P06753 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TPM3P06753 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.01■□□□□ 0.31
TPM3P06753 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17■□□□□ 0.31
TPM3P06753 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC17■□□□□ 0.31
TPM3P06753 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 AL356585.2-201ENST00000625078 2396 ntBASIC17■□□□□ 0.31
TPM3P06753 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17■□□□□ 0.31
TPM3P06753 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17■□□□□ 0.31
TPM3P06753 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TPM3P06753 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17■□□□□ 0.31
TPM3P06753 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17■□□□□ 0.31
TPM3P06753 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17■□□□□ 0.31
TPM3P06753 SPDYE17-201ENST00000412399 783 ntBASIC17■□□□□ 0.31
TPM3P06753 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TPM3P06753 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17■□□□□ 0.31
TPM3P06753 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17■□□□□ 0.31
TPM3P06753 KRT8P48-201ENST00000515599 1220 ntBASIC17■□□□□ 0.31
TPM3P06753 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17■□□□□ 0.31
TPM3P06753 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 AC015910.1-201ENST00000579400 975 ntBASIC17■□□□□ 0.31
TPM3P06753 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TPM3P06753 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TPM3P06753 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17■□□□□ 0.31
TPM3P06753 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TPM3P06753 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17■□□□□ 0.31
TPM3P06753 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17■□□□□ 0.31
TPM3P06753 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
TPM3P06753 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TPM3P06753 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17■□□□□ 0.31
TPM3P06753 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TPM3P06753 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TPM3P06753 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM3P06753 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.99■□□□□ 0.31
TPM3P06753 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms