Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBC1P01850 ECM1P1-201ENST00000604092 1279 ntBASIC15.13■□□□□ 0.01
TRBC1P01850 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBC1P01850 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.13■□□□□ 0.01
TRBC1P01850 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBC1P01850 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRBC1P01850 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBC1P01850 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRBC1P01850 CLUHP2-201ENST00000426660 1303 ntBASIC15.13■□□□□ 0.01
TRBC1P01850 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBC1P01850 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBC1P01850 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRBC1P01850 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 AC006001.1-201ENST00000325130 474 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 GK-202ENST00000378941 458 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 CD8B2-202ENST00000417670 633 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 AC022210.1-201ENST00000449856 793 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.12■□□□□ 0.01
TRBC1P01850 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 AC104989.1-201ENST00000519711 778 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 IGHV3-71-201ENST00000523324 359 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBC1P01850 AC017083.2-201ENST00000608069 979 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRBC1P01850 MIR6775-201ENST00000617557 69 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 AC138951.2-201ENST00000623455 1161 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 RHOXF1P1-202ENST00000635473 501 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBC1P01850 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 AC023824.1-201ENST00000562945 2975 ntBASIC15.12■□□□□ 0.01
TRBC1P01850 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRBC1P01850 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBC1P01850 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBC1P01850 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBC1P01850 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBC1P01850 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBC1P01850 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRBC1P01850 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBC1P01850 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBC1P01850 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBC1P01850 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBC1P01850 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBC1P01850 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBC1P01850 MESTP3-201ENST00000503460 968 ntBASIC15.11■□□□□ 0.01
TRBC1P01850 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBC1P01850 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms