Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTN3O95197 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 AC112693.3-201ENST00000624819 1983 ntBASIC15.96■□□□□ 0.15
RTN3O95197 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 AC013268.4-201ENST00000637413 2228 ntBASIC15.96■□□□□ 0.15
RTN3O95197 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 AHCYP2-201ENST00000430630 1300 ntBASIC15.96■□□□□ 0.15
RTN3O95197 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.96■□□□□ 0.15
RTN3O95197 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.96■□□□□ 0.15
RTN3O95197 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.96■□□□□ 0.15
RTN3O95197 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.96■□□□□ 0.15
RTN3O95197 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.96■□□□□ 0.15
RTN3O95197 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.96■□□□□ 0.15
RTN3O95197 DUX4L47-201ENST00000566374 394 ntBASIC15.96■□□□□ 0.15
RTN3O95197 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.96■□□□□ 0.15
RTN3O95197 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 AC136621.1-201ENST00000624017 2304 ntBASIC15.96■□□□□ 0.15
RTN3O95197 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTN3O95197 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN3O95197 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTN3O95197 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RTN3O95197 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RTN3O95197 C18orf15-201ENST00000623680 2534 ntBASIC15.96■□□□□ 0.14
RTN3O95197 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.96■□□□□ 0.14
RTN3O95197 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.96■□□□□ 0.14
RTN3O95197 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.96■□□□□ 0.14
RTN3O95197 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RTN3O95197 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RTN3O95197 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RTN3O95197 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RTN3O95197 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 REXO1L5P-201ENST00000622260 2098 ntBASIC15.95■□□□□ 0.14
RTN3O95197 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RTN3O95197 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 AL590640.2-201ENST00000457038 527 ntBASIC15.95■□□□□ 0.14
RTN3O95197 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.95■□□□□ 0.14
RTN3O95197 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.95■□□□□ 0.14
RTN3O95197 DUX4L45-201ENST00000566406 1057 ntBASIC15.95■□□□□ 0.14
RTN3O95197 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN3O95197 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 ECM1P1-201ENST00000604092 1279 ntBASIC15.95■□□□□ 0.14
RTN3O95197 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN3O95197 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RTN3O95197 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN3O95197 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms