Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AC018442.1-201ENST00000421439 2061 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 ACTG1P3-201ENST00000431775 1114 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 COX20P2-201ENST00000452636 358 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 RN7SL692P-201ENST00000464677 288 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 GIMAP3P-201ENST00000495150 836 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AC026434.2-201ENST00000506094 1078 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AP005018.1-201ENST00000525475 301 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 LRRC59-203ENST00000576448 1531 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 AC018529.2-202ENST00000611482 3087 ntBASIC13.48□□□□□ -0.25
TRAF3IP2O43734 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAF3IP2O43734 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC012441.1-201ENST00000446669 685 ntBASIC13.47□□□□□ -0.25
TRAF3IP2O43734 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 RN7SL837P-201ENST00000463010 287 ntBASIC13.47□□□□□ -0.25
TRAF3IP2O43734 RN7SL752P-201ENST00000463779 287 ntBASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC097376.2-205ENST00000610159 5334 ntBASIC13.47□□□□□ -0.25
TRAF3IP2O43734 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAF3IP2O43734 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAF3IP2O43734 AL136379.1-201ENST00000623471 2642 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms