Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 EIF3FP3-201ENST00000434851 1086 ntBASIC16.13■□□□□ 0.17
O00370 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.13■□□□□ 0.17
O00370 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 KRT18P25-201ENST00000508931 1278 ntBASIC16.13■□□□□ 0.17
O00370 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.13■□□□□ 0.17
O00370 DUX4L47-201ENST00000566374 394 ntBASIC16.13■□□□□ 0.17
O00370 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.13■□□□□ 0.17
O00370 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.13■□□□□ 0.17
O00370 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.13■□□□□ 0.17
O00370 AC015936.2-201ENST00000593177 259 ntBASIC16.13■□□□□ 0.17
O00370 AC008735.3-201ENST00000596646 500 ntBASIC16.13■□□□□ 0.17
O00370 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.13■□□□□ 0.17
O00370 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
O00370 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
O00370 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.13■□□□□ 0.17
O00370 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
O00370 AC134312.5-201ENST00000568031 1313 ntBASIC16.13■□□□□ 0.17
O00370 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.13■□□□□ 0.17
O00370 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.13■□□□□ 0.17
O00370 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.13■□□□□ 0.17
O00370 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.12■□□□□ 0.17
O00370 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.12■□□□□ 0.17
O00370 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
O00370 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
O00370 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.12■□□□□ 0.17
O00370 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
O00370 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.12■□□□□ 0.17
O00370 GAPDHP21-201ENST00000450301 1010 ntBASIC16.12■□□□□ 0.17
O00370 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.12■□□□□ 0.17
O00370 AC022616.1-201ENST00000518688 554 ntBASIC16.12■□□□□ 0.17
O00370 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.12■□□□□ 0.17
O00370 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.12■□□□□ 0.17
O00370 AP001889.1-201ENST00000525414 633 ntBASIC16.12■□□□□ 0.17
O00370 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.12■□□□□ 0.17
O00370 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
O00370 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.12■□□□□ 0.17
O00370 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
O00370 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.12■□□□□ 0.17
O00370 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
O00370 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
O00370 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
O00370 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.11■□□□□ 0.17
O00370 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.11■□□□□ 0.17
O00370 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
O00370 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.11■□□□□ 0.17
O00370 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
O00370 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
O00370 GIMAP3P-201ENST00000495150 836 ntBASIC16.11■□□□□ 0.17
O00370 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.11■□□□□ 0.17
O00370 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.11■□□□□ 0.17
O00370 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.11■□□□□ 0.17
O00370 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.11■□□□□ 0.17
O00370 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
O00370 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
O00370 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms