Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 PTPRVP-205ENST00000641549 5067 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 AC012313.8-201ENST00000595059 5402 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 LINC00265-3P-201ENST00000447588 903 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 TSSC2-201ENST00000450217 709 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TOB2P1-201ENST00000469761 992 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 Z69720.1-201ENST00000601483 472 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 AL353135.1-201ENST00000606729 504 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 AC015819.3-201ENST00000624305 2674 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 SIGLEC16-201ENST00000599858 1437 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 FAM90A11P-201ENST00000518378 2218 ntBASIC10.73□□□□□ -0.69
TMEM238C9JI98 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.73□□□□□ -0.69
TMEM238C9JI98 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TMEM238C9JI98 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC020763.3-201ENST00000625095 2904 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 FUOM-202ENST00000368551 628 ntTSL 3 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 PMS2P1-201ENST00000431037 1228 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC010331.1-201ENST00000611423 582 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 REXO1L3P-201ENST00000622202 1288 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms