Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.07■□□□□ 0.8
SBNO1A3KN83 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 OR2R1P-201ENST00000441404 914 ntBASIC20.07■□□□□ 0.8
SBNO1A3KN83 AP000911.2-201ENST00000534330 502 ntBASIC20.07■□□□□ 0.8
SBNO1A3KN83 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.07■□□□□ 0.8
SBNO1A3KN83 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC20.07■□□□□ 0.8
SBNO1A3KN83 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.07■□□□□ 0.8
SBNO1A3KN83 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 MROH4P-201ENST00000431302 1578 ntBASIC20.06■□□□□ 0.8
SBNO1A3KN83 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 AC126365.1-201ENST00000578585 1514 ntBASIC20.06■□□□□ 0.8
SBNO1A3KN83 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 AHCYP4-201ENST00000419201 1315 ntBASIC20.06■□□□□ 0.8
SBNO1A3KN83 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SBNO1A3KN83 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 Z69890.1-201ENST00000382990 339 ntBASIC20.06■□□□□ 0.8
SBNO1A3KN83 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 AC005041.3-201ENST00000606287 649 ntBASIC20.06■□□□□ 0.8
SBNO1A3KN83 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 TMBIM7P-202ENST00000641474 1516 ntBASIC20.06■□□□□ 0.8
SBNO1A3KN83 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.06■□□□□ 0.8
SBNO1A3KN83 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 LINC01815-202ENST00000641468 1409 ntBASIC20.05■□□□□ 0.8
SBNO1A3KN83 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 AC023024.2-201ENST00000623561 1993 ntBASIC20.05■□□□□ 0.8
SBNO1A3KN83 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.05■□□□□ 0.8
SBNO1A3KN83 FO393412.1-201ENST00000619841 382 ntBASIC20.05■□□□□ 0.8
SBNO1A3KN83 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SBNO1A3KN83 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 AC023090.2-201ENST00000625182 2110 ntBASIC20.04■□□□□ 0.8
SBNO1A3KN83 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 AC092638.2-201ENST00000441105 947 ntBASIC20.04■□□□□ 0.8
SBNO1A3KN83 AC003686.1-201ENST00000550956 1034 ntBASIC20.04■□□□□ 0.8
SBNO1A3KN83 C2orf69P1-201ENST00000563532 1093 ntBASIC20.04■□□□□ 0.8
SBNO1A3KN83 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 AC138466.5-201ENST00000624002 808 ntBASIC20.04■□□□□ 0.8
SBNO1A3KN83 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SBNO1A3KN83 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SBNO1A3KN83 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms