Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
CCDC144AA2RUR9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC144AA2RUR9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC144AA2RUR9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC144AA2RUR9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC144AA2RUR9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC144AA2RUR9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 KRT18P36-201ENST00000411618 1276 ntBASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 AC116345.2-201ENST00000512837 523 ntBASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC21.39■■□□□ 1.02
CCDC144AA2RUR9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 MRPL37P1-201ENST00000592451 1337 ntBASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 AC144522.1-201ENST00000625111 1658 ntBASIC21.39■■□□□ 1.01
CCDC144AA2RUR9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 CMC1-204ENST00000423894 549 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 AC090857.1-201ENST00000527400 390 ntBASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 AC133540.1-201ENST00000620845 1019 ntBASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 MVK-217ENST00000639206 367 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 NAP1L6-202ENST00000641404 1222 ntBASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 HINT2P1-201ENST00000419438 481 ntBASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 SNX1-214ENST00000625244 324 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC144AA2RUR9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AL136172.1-201ENST00000598590 1394 ntBASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AGAP7P-201ENST00000582299 2062 ntBASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AGAP14-201ENST00000624701 2060 ntBASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms