Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV5-4A0A0C4DH59 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC009093.2-202ENST00000620513 2079 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 ANKRD19P-201ENST00000338192 862 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 TPT1P11-201ENST00000458482 498 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 RAB43P1-201ENST00000561790 589 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 OR10B1P-201ENST00000601666 907 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AP001002.3-201ENST00000623482 206 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 AC092135.3-201ENST00000624151 1846 ntBASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV5-4A0A0C4DH59 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 MRPL37P1-201ENST00000592451 1337 ntBASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.77□□□□□ -0.04
TRBV5-4A0A0C4DH59 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 AC234783.1-201ENST00000441761 496 ntBASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 ACA64.2-201ENST00000459014 129 ntBASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 RN7SL713P-201ENST00000582127 302 ntBASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 AC073413.1-201ENST00000603927 732 ntBASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV5-4A0A0C4DH59 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV5-4A0A0C4DH59 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms