Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 AC131212.1-201ENST00000613771 668 ntBASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.39■■■□□ 2.14
TNFRSF11AQ9Y6Q6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TNFRSF11AQ9Y6Q6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
TNFRSF11AQ9Y6Q6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TNFRSF11AQ9Y6Q6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.37■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
TNFRSF11AQ9Y6Q6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TNFRSF11AQ9Y6Q6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
TNFRSF11AQ9Y6Q6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.36■■■□□ 2.13
TNFRSF11AQ9Y6Q6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TNFRSF11AQ9Y6Q6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 MTDHP2-201ENST00000601468 714 ntBASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.35■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.34■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.33■■■□□ 2.13
TNFRSF11AQ9Y6Q6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 MIR6722-201ENST00000617286 78 ntBASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AL117332.1-201ENST00000622628 974 ntBASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 LINC01124-201ENST00000409786 2117 ntBASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 MIR6724-1-201ENST00000616420 92 ntBASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 MIR6724-2-201ENST00000616483 92 ntBASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 MIR6724-4-201ENST00000617390 92 ntBASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 MIR6724-3-201ENST00000622482 92 ntBASIC28.3■■■□□ 2.12
TNFRSF11AQ9Y6Q6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.29■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.29■■■□□ 2.12
TNFRSF11AQ9Y6Q6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TNFRSF11AQ9Y6Q6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
TNFRSF11AQ9Y6Q6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.27■■■□□ 2.12
TNFRSF11AQ9Y6Q6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms