Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB1Q9Y5F3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB1Q9Y5F3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 AC131281.2-201ENST00000520478 145 ntBASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB1Q9Y5F3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 AL139246.5-201ENST00000606645 996 ntBASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB1Q9Y5F3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PCDHB1Q9Y5F3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 AC092028.1-203ENST00000608262 953 ntBASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB1Q9Y5F3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDHB1Q9Y5F3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDHB1Q9Y5F3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDHB1Q9Y5F3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
PCDHB1Q9Y5F3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PCDHB1Q9Y5F3 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHB1Q9Y5F3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHB1Q9Y5F3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 AL136116.3-201ENST00000402907 1138 ntBASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHB1Q9Y5F3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 MIR4281-201ENST00000580852 62 ntBASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHB1Q9Y5F3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 AL161729.1-201ENST00000604104 1402 ntBASIC22.9■■□□□ 1.26
PCDHB1Q9Y5F3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHB1Q9Y5F3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
PCDHB1Q9Y5F3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms