Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTCBQ9Y3I0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTCBQ9Y3I0 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.38■■■□□ 2.29
RTCBQ9Y3I0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTCBQ9Y3I0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RTCBQ9Y3I0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.36■■■□□ 2.29
RTCBQ9Y3I0 AC136469.2-201ENST00000623944 1028 ntBASIC29.36■■■□□ 2.29
RTCBQ9Y3I0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RTCBQ9Y3I0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.36■■■□□ 2.29
RTCBQ9Y3I0 AC010501.1-201ENST00000606270 1962 ntBASIC29.35■■■□□ 2.29
RTCBQ9Y3I0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RTCBQ9Y3I0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.35■■■□□ 2.29
RTCBQ9Y3I0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
RTCBQ9Y3I0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTCBQ9Y3I0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 AC241377.3-202ENST00000626088 1088 ntBASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 AC241585.3-202ENST00000628937 1088 ntBASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 AC245100.8-202ENST00000629247 1058 ntBASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.33■■■□□ 2.29
RTCBQ9Y3I0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 C17orf82-201ENST00000623772 1530 ntBASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.32■■■□□ 2.28
RTCBQ9Y3I0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 AC233992.3-201ENST00000607491 485 ntBASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.31■■■□□ 2.28
RTCBQ9Y3I0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
RTCBQ9Y3I0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RTCBQ9Y3I0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.29■■■□□ 2.28
RTCBQ9Y3I0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.29■■■□□ 2.28
RTCBQ9Y3I0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.29■■■□□ 2.28
RTCBQ9Y3I0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RTCBQ9Y3I0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.29■■■□□ 2.28
RTCBQ9Y3I0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 BX842568.3-201ENST00000418104 571 ntBASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 AC090192.1-201ENST00000517740 490 ntBASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 RARRES2P11-201ENST00000635158 484 ntBASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RTCBQ9Y3I0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTCBQ9Y3I0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RTCBQ9Y3I0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RTCBQ9Y3I0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
RTCBQ9Y3I0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTCBQ9Y3I0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
RTCBQ9Y3I0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
RTCBQ9Y3I0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RTCBQ9Y3I0 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.26■■■□□ 2.27
RTCBQ9Y3I0 AC006455.2-201ENST00000429931 906 ntBASIC29.26■■■□□ 2.27
RTCBQ9Y3I0 AC034268.1-201ENST00000441047 882 ntBASIC29.26■■■□□ 2.27
RTCBQ9Y3I0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RTCBQ9Y3I0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RTCBQ9Y3I0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RTCBQ9Y3I0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RTCBQ9Y3I0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms