Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.49■□□□□ 0.87
LSM2Q9Y333 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.49■□□□□ 0.87
LSM2Q9Y333 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LSM2Q9Y333 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
LSM2Q9Y333 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSM2Q9Y333 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LSM2Q9Y333 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSM2Q9Y333 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
LSM2Q9Y333 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSM2Q9Y333 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSM2Q9Y333 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM2Q9Y333 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
LSM2Q9Y333 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM2Q9Y333 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM2Q9Y333 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSM2Q9Y333 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.46■□□□□ 0.87
LSM2Q9Y333 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.46■□□□□ 0.87
LSM2Q9Y333 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
LSM2Q9Y333 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LSM2Q9Y333 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LSM2Q9Y333 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.45■□□□□ 0.86
LSM2Q9Y333 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LSM2Q9Y333 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSM2Q9Y333 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.45■□□□□ 0.86
LSM2Q9Y333 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LSM2Q9Y333 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.44■□□□□ 0.86
LSM2Q9Y333 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM2Q9Y333 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM2Q9Y333 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM2Q9Y333 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
LSM2Q9Y333 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.44■□□□□ 0.86
LSM2Q9Y333 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM2Q9Y333 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.44■□□□□ 0.86
LSM2Q9Y333 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSM2Q9Y333 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LSM2Q9Y333 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.43■□□□□ 0.86
LSM2Q9Y333 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSM2Q9Y333 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.43■□□□□ 0.86
LSM2Q9Y333 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM2Q9Y333 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.42■□□□□ 0.86
LSM2Q9Y333 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LSM2Q9Y333 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM2Q9Y333 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LSM2Q9Y333 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM2Q9Y333 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.42■□□□□ 0.86
LSM2Q9Y333 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM2Q9Y333 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LSM2Q9Y333 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.42■□□□□ 0.86
LSM2Q9Y333 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.42■□□□□ 0.86
LSM2Q9Y333 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.42■□□□□ 0.86
LSM2Q9Y333 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM2Q9Y333 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.41■□□□□ 0.86
LSM2Q9Y333 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.41■□□□□ 0.86
LSM2Q9Y333 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.41■□□□□ 0.86
LSM2Q9Y333 CR559946.2-201ENST00000623684 991 ntBASIC20.41■□□□□ 0.86
LSM2Q9Y333 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM2Q9Y333 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM2Q9Y333 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.41■□□□□ 0.86
LSM2Q9Y333 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM2Q9Y333 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM2Q9Y333 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms