Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
NINLQ9Y2I6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
NINLQ9Y2I6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
NINLQ9Y2I6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
NINLQ9Y2I6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NINLQ9Y2I6 AC110285.6-201ENST00000617652 491 ntBASIC31.69■■■□□ 2.66
NINLQ9Y2I6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.69■■■□□ 2.66
NINLQ9Y2I6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
NINLQ9Y2I6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.69■■■□□ 2.66
NINLQ9Y2I6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
NINLQ9Y2I6 RARRES2P6-201ENST00000567333 442 ntBASIC31.68■■■□□ 2.66
NINLQ9Y2I6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.68■■■□□ 2.66
NINLQ9Y2I6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
NINLQ9Y2I6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.68■■■□□ 2.66
NINLQ9Y2I6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.67■■■□□ 2.66
NINLQ9Y2I6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.67■■■□□ 2.66
NINLQ9Y2I6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NINLQ9Y2I6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.67■■■□□ 2.66
NINLQ9Y2I6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NINLQ9Y2I6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.66■■■□□ 2.66
NINLQ9Y2I6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.66■■■□□ 2.66
NINLQ9Y2I6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
NINLQ9Y2I6 HLA-L-211ENST00000482052 1765 ntBASIC31.65■■■□□ 2.66
NINLQ9Y2I6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
NINLQ9Y2I6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 AC104564.3-201ENST00000582367 638 ntBASIC31.64■■■□□ 2.66
NINLQ9Y2I6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
NINLQ9Y2I6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.65
NINLQ9Y2I6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NINLQ9Y2I6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.63■■■□□ 2.65
NINLQ9Y2I6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NINLQ9Y2I6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.63■■■□□ 2.65
NINLQ9Y2I6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.63■■■□□ 2.65
NINLQ9Y2I6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.62■■■□□ 2.65
NINLQ9Y2I6 AP003733.4-201ENST00000623785 1697 ntBASIC31.61■■■□□ 2.65
NINLQ9Y2I6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NINLQ9Y2I6 AC096631.2-201ENST00000436136 790 ntBASIC31.61■■■□□ 2.65
NINLQ9Y2I6 SRD5A1P1-201ENST00000442297 786 ntBASIC31.61■■■□□ 2.65
NINLQ9Y2I6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NINLQ9Y2I6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NINLQ9Y2I6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
NINLQ9Y2I6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
NINLQ9Y2I6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NINLQ9Y2I6 AC022211.4-201ENST00000625094 2161 ntBASIC31.6■■■□□ 2.65
NINLQ9Y2I6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 AC133561.4-201ENST00000566112 224 ntBASIC31.6■■■□□ 2.65
NINLQ9Y2I6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NINLQ9Y2I6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NINLQ9Y2I6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
NINLQ9Y2I6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
NINLQ9Y2I6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.59■■■□□ 2.65
NINLQ9Y2I6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
NINLQ9Y2I6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.58■■■□□ 2.65
NINLQ9Y2I6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
NINLQ9Y2I6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
NINLQ9Y2I6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
NINLQ9Y2I6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NINLQ9Y2I6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
NINLQ9Y2I6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
NINLQ9Y2I6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
NINLQ9Y2I6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
NINLQ9Y2I6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
NINLQ9Y2I6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
NINLQ9Y2I6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
NINLQ9Y2I6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
NINLQ9Y2I6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
NINLQ9Y2I6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.56■■■□□ 2.64
NINLQ9Y2I6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
NINLQ9Y2I6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.56■■■□□ 2.64
NINLQ9Y2I6 AC005837.3-201ENST00000612163 286 ntBASIC31.56■■■□□ 2.64
NINLQ9Y2I6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms