Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LIN7CQ9NUP9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LIN7CQ9NUP9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LIN7CQ9NUP9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIN7CQ9NUP9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LIN7CQ9NUP9 RPS2P7-201ENST00000447334 885 ntBASIC19■□□□□ 0.63
LIN7CQ9NUP9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19■□□□□ 0.63
LIN7CQ9NUP9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19■□□□□ 0.63
LIN7CQ9NUP9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19■□□□□ 0.63
LIN7CQ9NUP9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LIN7CQ9NUP9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 AC139795.1-202ENST00000500444 432 ntBASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 AC087393.1-201ENST00000582896 145 ntBASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIN7CQ9NUP9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 AC074183.2-201ENST00000623112 922 ntBASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIN7CQ9NUP9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LIN7CQ9NUP9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIN7CQ9NUP9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 BHLHE23-202ENST00000612929 1109 ntBASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIN7CQ9NUP9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIN7CQ9NUP9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms