Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF146Q9NTX7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.38■■□□□ 1.81
RNF146Q9NTX7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RNF146Q9NTX7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 AL136162.1-201ENST00000607711 1078 ntBASIC26.36■■□□□ 1.81
RNF146Q9NTX7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNF146Q9NTX7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.35■■□□□ 1.81
RNF146Q9NTX7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF146Q9NTX7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.35■■□□□ 1.81
RNF146Q9NTX7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.35■■□□□ 1.81
RNF146Q9NTX7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RNF146Q9NTX7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF146Q9NTX7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.33■■□□□ 1.81
RNF146Q9NTX7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF146Q9NTX7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF146Q9NTX7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF146Q9NTX7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.33■■□□□ 1.8
RNF146Q9NTX7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RNF146Q9NTX7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 AC135279.3-201ENST00000610945 1311 ntBASIC26.31■■□□□ 1.8
RNF146Q9NTX7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF146Q9NTX7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 AC024257.2-201ENST00000549699 147 ntBASIC26.3■■□□□ 1.8
RNF146Q9NTX7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.3■■□□□ 1.8
RNF146Q9NTX7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 HLA-L-211ENST00000482052 1765 ntBASIC26.29■■□□□ 1.8
RNF146Q9NTX7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF146Q9NTX7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 AL031432.3-201ENST00000607698 485 ntBASIC26.28■■□□□ 1.8
RNF146Q9NTX7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF146Q9NTX7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF146Q9NTX7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms