Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP1R3EQ9H7J1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP1R3EQ9H7J1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
PPP1R3EQ9H7J1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3EQ9H7J1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3EQ9H7J1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 AL024507.2-201ENST00000606070 2574 ntBASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 KRT18P60-201ENST00000312876 1297 ntBASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3EQ9H7J1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP1R3EQ9H7J1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP1R3EQ9H7J1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.27■□□□□ 0.83
PPP1R3EQ9H7J1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 DUX4L9-201ENST00000449051 1259 ntBASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP1R3EQ9H7J1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3EQ9H7J1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms