Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NUCKS1Q9H1E3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.87■■□□□ 1.57
NUCKS1Q9H1E3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NUCKS1Q9H1E3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 BHLHE23-202ENST00000612929 1109 ntBASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
NUCKS1Q9H1E3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 AC139795.1-202ENST00000500444 432 ntBASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NUCKS1Q9H1E3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
NUCKS1Q9H1E3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NUCKS1Q9H1E3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
NUCKS1Q9H1E3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NUCKS1Q9H1E3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
NUCKS1Q9H1E3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NUCKS1Q9H1E3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
NUCKS1Q9H1E3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 AC010980.1-201ENST00000587192 1142 ntBASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NUCKS1Q9H1E3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
NUCKS1Q9H1E3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NUCKS1Q9H1E3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
NUCKS1Q9H1E3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NUCKS1Q9H1E3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NUCKS1Q9H1E3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NUCKS1Q9H1E3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms