Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXB1Q99853 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXB1Q99853 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXB1Q99853 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXB1Q99853 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXB1Q99853 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXB1Q99853 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXB1Q99853 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXB1Q99853 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXB1Q99853 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXB1Q99853 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXB1Q99853 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXB1Q99853 KRT125P-201ENST00000546827 989 ntBASIC20.23■□□□□ 0.83
FOXB1Q99853 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXB1Q99853 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.23■□□□□ 0.83
FOXB1Q99853 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXB1Q99853 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
FOXB1Q99853 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXB1Q99853 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FOXB1Q99853 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXB1Q99853 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXB1Q99853 AC004812.2-201ENST00000611079 2094 ntBASIC20.22■□□□□ 0.83
FOXB1Q99853 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXB1Q99853 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXB1Q99853 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXB1Q99853 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXB1Q99853 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXB1Q99853 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXB1Q99853 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXB1Q99853 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXB1Q99853 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXB1Q99853 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXB1Q99853 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXB1Q99853 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXB1Q99853 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXB1Q99853 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXB1Q99853 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXB1Q99853 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXB1Q99853 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
FOXB1Q99853 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXB1Q99853 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXB1Q99853 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXB1Q99853 AC239859.2-201ENST00000444165 318 ntBASIC20.2■□□□□ 0.82
FOXB1Q99853 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXB1Q99853 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXB1Q99853 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXB1Q99853 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXB1Q99853 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXB1Q99853 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXB1Q99853 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXB1Q99853 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FOXB1Q99853 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXB1Q99853 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXB1Q99853 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXB1Q99853 AC004448.1-201ENST00000458332 883 ntBASIC20.19■□□□□ 0.82
FOXB1Q99853 AL035685.1-201ENST00000636663 812 ntBASIC20.19■□□□□ 0.82
FOXB1Q99853 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXB1Q99853 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FOXB1Q99853 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXB1Q99853 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXB1Q99853 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXB1Q99853 MIR4787-201ENST00000607364 84 ntBASIC20.18■□□□□ 0.82
FOXB1Q99853 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXB1Q99853 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXB1Q99853 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXB1Q99853 SNX5-217ENST00000606557 1087 ntBASIC20.17■□□□□ 0.82
FOXB1Q99853 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
FOXB1Q99853 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXB1Q99853 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXB1Q99853 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXB1Q99853 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXB1Q99853 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXB1Q99853 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXB1Q99853 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXB1Q99853 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXB1Q99853 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXB1Q99853 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXB1Q99853 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXB1Q99853 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXB1Q99853 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXB1Q99853 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXB1Q99853 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.82
FOXB1Q99853 ABCB10P4-201ENST00000566803 2184 ntBASIC20.14■□□□□ 0.81
FOXB1Q99853 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXB1Q99853 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXB1Q99853 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXB1Q99853 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXB1Q99853 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXB1Q99853 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXB1Q99853 AC092028.1-203ENST00000608262 953 ntBASIC20.14■□□□□ 0.81
FOXB1Q99853 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXB1Q99853 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXB1Q99853 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.13■□□□□ 0.81
FOXB1Q99853 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms