Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.99■■□□□ 1.27
CPNE1Q99829 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE1Q99829 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.99■■□□□ 1.27
CPNE1Q99829 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE1Q99829 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE1Q99829 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE1Q99829 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE1Q99829 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE1Q99829 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CPNE1Q99829 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.98■■□□□ 1.27
CPNE1Q99829 U85056.1-201ENST00000616429 682 ntBASIC22.98■■□□□ 1.27
CPNE1Q99829 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE1Q99829 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE1Q99829 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.98■■□□□ 1.27
CPNE1Q99829 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE1Q99829 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CPNE1Q99829 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE1Q99829 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE1Q99829 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CPNE1Q99829 AC129492.7-201ENST00000622992 756 ntBASIC22.97■■□□□ 1.27
CPNE1Q99829 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE1Q99829 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE1Q99829 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CPNE1Q99829 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CPNE1Q99829 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CPNE1Q99829 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.96■■□□□ 1.27
CPNE1Q99829 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.96■■□□□ 1.27
CPNE1Q99829 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE1Q99829 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.96■■□□□ 1.27
CPNE1Q99829 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.95■■□□□ 1.26
CPNE1Q99829 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.94■■□□□ 1.26
CPNE1Q99829 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CPNE1Q99829 HSD17B1P1-201ENST00000590052 955 ntBASIC22.94■■□□□ 1.26
CPNE1Q99829 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.94■■□□□ 1.26
CPNE1Q99829 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE1Q99829 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CPNE1Q99829 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CPNE1Q99829 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE1Q99829 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE1Q99829 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE1Q99829 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.93■■□□□ 1.26
CPNE1Q99829 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CPNE1Q99829 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPNE1Q99829 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.92■■□□□ 1.26
CPNE1Q99829 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE1Q99829 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.92■■□□□ 1.26
CPNE1Q99829 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.92■■□□□ 1.26
CPNE1Q99829 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CPNE1Q99829 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.92■■□□□ 1.26
CPNE1Q99829 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.92■■□□□ 1.26
CPNE1Q99829 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPNE1Q99829 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE1Q99829 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CPNE1Q99829 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE1Q99829 AL022069.1-201ENST00000568025 1636 ntBASIC22.91■■□□□ 1.26
CPNE1Q99829 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CPNE1Q99829 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.91■■□□□ 1.26
CPNE1Q99829 AC011551.1-201ENST00000614101 683 ntBASIC22.91■■□□□ 1.26
CPNE1Q99829 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPNE1Q99829 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE1Q99829 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE1Q99829 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE1Q99829 ANOS2P-203ENST00000472227 1816 ntBASIC22.9■■□□□ 1.26
CPNE1Q99829 KRT18P60-201ENST00000312876 1297 ntBASIC22.9■■□□□ 1.26
CPNE1Q99829 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.9■■□□□ 1.26
CPNE1Q99829 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CPNE1Q99829 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
CPNE1Q99829 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.9■■□□□ 1.26
CPNE1Q99829 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.9■■□□□ 1.26
CPNE1Q99829 C9orf163-202ENST00000624034 2573 ntBASIC22.9■■□□□ 1.26
CPNE1Q99829 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPNE1Q99829 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.89■■□□□ 1.26
CPNE1Q99829 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CPNE1Q99829 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.89■■□□□ 1.26
CPNE1Q99829 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.89■■□□□ 1.26
CPNE1Q99829 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CPNE1Q99829 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE1Q99829 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE1Q99829 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.89■■□□□ 1.25
CPNE1Q99829 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.89■■□□□ 1.25
CPNE1Q99829 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE1Q99829 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.89■■□□□ 1.25
CPNE1Q99829 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CPNE1Q99829 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CPNE1Q99829 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE1Q99829 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE1Q99829 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CPNE1Q99829 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms