Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.88■□□□□ 0.61
S1PR3Q99500 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.88■□□□□ 0.61
S1PR3Q99500 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
S1PR3Q99500 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
S1PR3Q99500 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
S1PR3Q99500 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.87■□□□□ 0.61
S1PR3Q99500 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
S1PR3Q99500 AC011551.1-201ENST00000614101 683 ntBASIC18.87■□□□□ 0.61
S1PR3Q99500 ABCB10P4-201ENST00000566803 2184 ntBASIC18.86■□□□□ 0.61
S1PR3Q99500 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.86■□□□□ 0.61
S1PR3Q99500 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
S1PR3Q99500 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
S1PR3Q99500 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.86■□□□□ 0.61
S1PR3Q99500 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
S1PR3Q99500 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
S1PR3Q99500 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
S1PR3Q99500 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
S1PR3Q99500 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
S1PR3Q99500 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 AC010980.1-201ENST00000587192 1142 ntBASIC18.85■□□□□ 0.61
S1PR3Q99500 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.85■□□□□ 0.61
S1PR3Q99500 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
S1PR3Q99500 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.85■□□□□ 0.61
S1PR3Q99500 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.85■□□□□ 0.61
S1PR3Q99500 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S1PR3Q99500 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
S1PR3Q99500 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.84■□□□□ 0.61
S1PR3Q99500 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
S1PR3Q99500 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
S1PR3Q99500 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.84■□□□□ 0.61
S1PR3Q99500 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S1PR3Q99500 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
S1PR3Q99500 AL161729.1-201ENST00000604104 1402 ntBASIC18.83■□□□□ 0.61
S1PR3Q99500 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
S1PR3Q99500 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.83■□□□□ 0.6
S1PR3Q99500 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
S1PR3Q99500 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
S1PR3Q99500 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
S1PR3Q99500 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
S1PR3Q99500 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
S1PR3Q99500 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.82■□□□□ 0.6
S1PR3Q99500 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
S1PR3Q99500 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.82■□□□□ 0.6
S1PR3Q99500 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
S1PR3Q99500 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
S1PR3Q99500 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
S1PR3Q99500 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.82■□□□□ 0.6
S1PR3Q99500 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.82■□□□□ 0.6
S1PR3Q99500 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
S1PR3Q99500 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.82■□□□□ 0.6
S1PR3Q99500 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
S1PR3Q99500 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.81■□□□□ 0.6
S1PR3Q99500 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
S1PR3Q99500 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
S1PR3Q99500 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
S1PR3Q99500 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.81■□□□□ 0.6
S1PR3Q99500 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.81■□□□□ 0.6
S1PR3Q99500 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
S1PR3Q99500 PVT1_1.1-201ENST00000615125 194 ntBASIC18.81■□□□□ 0.6
S1PR3Q99500 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
S1PR3Q99500 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
S1PR3Q99500 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.8■□□□□ 0.6
S1PR3Q99500 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
S1PR3Q99500 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
S1PR3Q99500 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
S1PR3Q99500 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
S1PR3Q99500 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
S1PR3Q99500 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
S1PR3Q99500 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms