Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB18PQ96TA0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHB18PQ96TA0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB18PQ96TA0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB18PQ96TA0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
PCDHB18PQ96TA0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB18PQ96TA0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB18PQ96TA0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB18PQ96TA0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB18PQ96TA0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB18PQ96TA0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB18PQ96TA0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB18PQ96TA0 AC131274.2-201ENST00000580697 1507 ntBASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 AC103834.1-201ENST00000520383 144 ntBASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB18PQ96TA0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHB18PQ96TA0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDHB18PQ96TA0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 KRT18P24-201ENST00000344739 1156 ntBASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PCDHB18PQ96TA0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHB18PQ96TA0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 AF131216.4-201ENST00000638924 1588 ntBASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHB18PQ96TA0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 MIR4508-201ENST00000584178 70 ntBASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 AL161729.1-201ENST00000604104 1402 ntBASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB18PQ96TA0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 AL022069.1-201ENST00000568025 1636 ntBASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 MIR4281-201ENST00000580852 62 ntBASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHB18PQ96TA0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHB18PQ96TA0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
PCDHB18PQ96TA0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHB18PQ96TA0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.39■■□□□ 1.49
PCDHB18PQ96TA0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 THA1P-201ENST00000590384 1145 ntBASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB18PQ96TA0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms