Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ARRDC3Q96B67 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 AL022069.1-201ENST00000568025 1636 ntBASIC23.12■■□□□ 1.29
ARRDC3Q96B67 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.12■■□□□ 1.29
ARRDC3Q96B67 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ARRDC3Q96B67 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ARRDC3Q96B67 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ARRDC3Q96B67 AC005703.6-201ENST00000623265 1329 ntBASIC23.08■■□□□ 1.29
ARRDC3Q96B67 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.08■■□□□ 1.29
ARRDC3Q96B67 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ARRDC3Q96B67 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ARRDC3Q96B67 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ARRDC3Q96B67 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.08■■□□□ 1.29
ARRDC3Q96B67 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ARRDC3Q96B67 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ARRDC3Q96B67 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ARRDC3Q96B67 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
ARRDC3Q96B67 AP003733.4-201ENST00000623785 1697 ntBASIC23.06■■□□□ 1.28
ARRDC3Q96B67 AC138932.3-201ENST00000567634 1902 ntBASIC23.06■■□□□ 1.28
ARRDC3Q96B67 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARRDC3Q96B67 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ARRDC3Q96B67 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ARRDC3Q96B67 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.05■■□□□ 1.28
ARRDC3Q96B67 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.04■■□□□ 1.28
ARRDC3Q96B67 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ARRDC3Q96B67 AC020928.2-201ENST00000588717 2197 ntBASIC23.04■■□□□ 1.28
ARRDC3Q96B67 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
ARRDC3Q96B67 AC142381.3-201ENST00000568208 1670 ntBASIC23.03■■□□□ 1.28
ARRDC3Q96B67 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
ARRDC3Q96B67 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.03■■□□□ 1.28
ARRDC3Q96B67 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARRDC3Q96B67 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ARRDC3Q96B67 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.02■■□□□ 1.28
ARRDC3Q96B67 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ARRDC3Q96B67 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ARRDC3Q96B67 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms