Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.79■■■□□ 2.36
SMARCC1Q92922 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
SMARCC1Q92922 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.79■■■□□ 2.36
SMARCC1Q92922 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.79■■■□□ 2.36
SMARCC1Q92922 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMARCC1Q92922 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SMARCC1Q92922 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.79■■■□□ 2.36
SMARCC1Q92922 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SMARCC1Q92922 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SMARCC1Q92922 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
SMARCC1Q92922 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMARCC1Q92922 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.77■■■□□ 2.36
SMARCC1Q92922 AC136469.2-201ENST00000623944 1028 ntBASIC29.77■■■□□ 2.36
SMARCC1Q92922 AC241377.3-202ENST00000626088 1088 ntBASIC29.77■■■□□ 2.36
SMARCC1Q92922 AC241585.3-202ENST00000628937 1088 ntBASIC29.77■■■□□ 2.36
SMARCC1Q92922 AC245100.8-202ENST00000629247 1058 ntBASIC29.77■■■□□ 2.36
SMARCC1Q92922 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SMARCC1Q92922 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMARCC1Q92922 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SMARCC1Q92922 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.76■■■□□ 2.35
SMARCC1Q92922 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SMARCC1Q92922 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
SMARCC1Q92922 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC1Q92922 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC1Q92922 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.75■■■□□ 2.35
SMARCC1Q92922 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC1Q92922 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC1Q92922 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC1Q92922 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC1Q92922 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.74■■■□□ 2.35
SMARCC1Q92922 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.74■■■□□ 2.35
SMARCC1Q92922 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SMARCC1Q92922 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SMARCC1Q92922 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.74■■■□□ 2.35
SMARCC1Q92922 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.74■■■□□ 2.35
SMARCC1Q92922 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.74■■■□□ 2.35
SMARCC1Q92922 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
SMARCC1Q92922 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMARCC1Q92922 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.73■■■□□ 2.35
SMARCC1Q92922 C17orf82-201ENST00000623772 1530 ntBASIC29.73■■■□□ 2.35
SMARCC1Q92922 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.73■■■□□ 2.35
SMARCC1Q92922 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SMARCC1Q92922 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.73■■■□□ 2.35
SMARCC1Q92922 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
SMARCC1Q92922 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SMARCC1Q92922 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.72■■■□□ 2.35
SMARCC1Q92922 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.72■■■□□ 2.35
SMARCC1Q92922 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.72■■■□□ 2.35
SMARCC1Q92922 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.72■■■□□ 2.35
SMARCC1Q92922 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.72■■■□□ 2.35
SMARCC1Q92922 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.71■■■□□ 2.35
SMARCC1Q92922 AC233992.3-201ENST00000607491 485 ntBASIC29.71■■■□□ 2.35
SMARCC1Q92922 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
SMARCC1Q92922 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.71■■■□□ 2.35
SMARCC1Q92922 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
SMARCC1Q92922 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC1Q92922 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.7■■■□□ 2.35
SMARCC1Q92922 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.7■■■□□ 2.35
SMARCC1Q92922 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.7■■■□□ 2.34
SMARCC1Q92922 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
SMARCC1Q92922 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
SMARCC1Q92922 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SMARCC1Q92922 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SMARCC1Q92922 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SMARCC1Q92922 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.69■■■□□ 2.34
SMARCC1Q92922 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SMARCC1Q92922 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SMARCC1Q92922 BX842568.3-201ENST00000418104 571 ntBASIC29.68■■■□□ 2.34
SMARCC1Q92922 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SMARCC1Q92922 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.68■■■□□ 2.34
SMARCC1Q92922 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SMARCC1Q92922 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
SMARCC1Q92922 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC1Q92922 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC1Q92922 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
SMARCC1Q92922 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC1Q92922 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.67■■■□□ 2.34
SMARCC1Q92922 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC1Q92922 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC1Q92922 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
SMARCC1Q92922 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SMARCC1Q92922 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.66■■■□□ 2.34
SMARCC1Q92922 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SMARCC1Q92922 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SMARCC1Q92922 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.66■■■□□ 2.34
SMARCC1Q92922 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
SMARCC1Q92922 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SMARCC1Q92922 AL022069.1-201ENST00000568025 1636 ntBASIC29.64■■■□□ 2.34
SMARCC1Q92922 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
SMARCC1Q92922 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SMARCC1Q92922 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.64■■■□□ 2.34
SMARCC1Q92922 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.64■■■□□ 2.34
SMARCC1Q92922 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
SMARCC1Q92922 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.64■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms