Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM40Q8WWA1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM40Q8WWA1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMEM40Q8WWA1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
TMEM40Q8WWA1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEM40Q8WWA1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.22■■□□□ 1.63
TMEM40Q8WWA1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.22■■□□□ 1.63
TMEM40Q8WWA1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TMEM40Q8WWA1 AL031432.3-201ENST00000607698 485 ntBASIC25.22■■□□□ 1.63
TMEM40Q8WWA1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMEM40Q8WWA1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 AL136162.1-201ENST00000607711 1078 ntBASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM40Q8WWA1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
TMEM40Q8WWA1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.2■■□□□ 1.62
TMEM40Q8WWA1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM40Q8WWA1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM40Q8WWA1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 AL022069.1-201ENST00000568025 1636 ntBASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMEM40Q8WWA1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
TMEM40Q8WWA1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 AC135279.3-201ENST00000610945 1311 ntBASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 AC024257.2-201ENST00000549699 147 ntBASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 HLA-L-211ENST00000482052 1765 ntBASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
TMEM40Q8WWA1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM40Q8WWA1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 SUDS3P1-201ENST00000505831 966 ntBASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM40Q8WWA1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM40Q8WWA1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TMEM40Q8WWA1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.13■■□□□ 1.61
TMEM40Q8WWA1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM40Q8WWA1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM40Q8WWA1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.13■■□□□ 1.61
TMEM40Q8WWA1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.13■■□□□ 1.61
TMEM40Q8WWA1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.13■■□□□ 1.61
TMEM40Q8WWA1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms