Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF139Q8WU17 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF139Q8WU17 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF139Q8WU17 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF139Q8WU17 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF139Q8WU17 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF139Q8WU17 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
RNF139Q8WU17 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF139Q8WU17 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF139Q8WU17 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.12■■□□□ 1.45
RNF139Q8WU17 SNX5-217ENST00000606557 1087 ntBASIC24.12■■□□□ 1.45
RNF139Q8WU17 AC010997.5-201ENST00000609182 354 ntBASIC24.12■■□□□ 1.45
RNF139Q8WU17 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.12■■□□□ 1.45
RNF139Q8WU17 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF139Q8WU17 LINC01124-201ENST00000409786 2117 ntBASIC24.11■■□□□ 1.45
RNF139Q8WU17 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
RNF139Q8WU17 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF139Q8WU17 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF139Q8WU17 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF139Q8WU17 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF139Q8WU17 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF139Q8WU17 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF139Q8WU17 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF139Q8WU17 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF139Q8WU17 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF139Q8WU17 AL022069.1-201ENST00000568025 1636 ntBASIC24.1■■□□□ 1.45
RNF139Q8WU17 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF139Q8WU17 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF139Q8WU17 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF139Q8WU17 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF139Q8WU17 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF139Q8WU17 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF139Q8WU17 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF139Q8WU17 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.1■■□□□ 1.45
RNF139Q8WU17 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF139Q8WU17 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF139Q8WU17 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF139Q8WU17 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF139Q8WU17 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF139Q8WU17 AC004448.1-201ENST00000458332 883 ntBASIC24.09■■□□□ 1.45
RNF139Q8WU17 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RNF139Q8WU17 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.09■■□□□ 1.45
RNF139Q8WU17 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF139Q8WU17 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RNF139Q8WU17 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF139Q8WU17 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF139Q8WU17 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF139Q8WU17 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.08■■□□□ 1.45
RNF139Q8WU17 AC131274.2-201ENST00000580697 1507 ntBASIC24.08■■□□□ 1.45
RNF139Q8WU17 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
RNF139Q8WU17 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RNF139Q8WU17 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF139Q8WU17 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.07■■□□□ 1.44
RNF139Q8WU17 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF139Q8WU17 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF139Q8WU17 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF139Q8WU17 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.07■■□□□ 1.44
RNF139Q8WU17 AC093323.1-202ENST00000635031 2045 ntBASIC24.06■■□□□ 1.44
RNF139Q8WU17 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF139Q8WU17 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF139Q8WU17 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 AC131212.1-201ENST00000613771 668 ntBASIC24.06■■□□□ 1.44
RNF139Q8WU17 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF139Q8WU17 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF139Q8WU17 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF139Q8WU17 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF139Q8WU17 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF139Q8WU17 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF139Q8WU17 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RNF139Q8WU17 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.05■■□□□ 1.44
RNF139Q8WU17 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF139Q8WU17 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.05■■□□□ 1.44
RNF139Q8WU17 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF139Q8WU17 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RNF139Q8WU17 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 MIR6722-201ENST00000617286 78 ntBASIC24.04■■□□□ 1.44
RNF139Q8WU17 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF139Q8WU17 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF139Q8WU17 LINC00543-201ENST00000567234 1845 ntBASIC24.03■■□□□ 1.44
RNF139Q8WU17 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF139Q8WU17 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
RNF139Q8WU17 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.03■■□□□ 1.44
RNF139Q8WU17 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RNF139Q8WU17 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF139Q8WU17 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF139Q8WU17 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF139Q8WU17 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.03■■□□□ 1.44
RNF139Q8WU17 MIR6724-1-201ENST00000616420 92 ntBASIC24.03■■□□□ 1.44
RNF139Q8WU17 MIR6724-2-201ENST00000616483 92 ntBASIC24.03■■□□□ 1.44
RNF139Q8WU17 MIR6724-4-201ENST00000617390 92 ntBASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms