Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01560Q8TB33 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01560Q8TB33 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
LINC01560Q8TB33 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.02■□□□□ 0.8
LINC01560Q8TB33 SYT6-210ENST00000641643 1587 ntBASIC20.02■□□□□ 0.8
LINC01560Q8TB33 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LINC01560Q8TB33 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01560Q8TB33 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
LINC01560Q8TB33 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 AF213884.3-201ENST00000563833 479 ntBASIC20.01■□□□□ 0.79
LINC01560Q8TB33 AL136967.2-201ENST00000623968 743 ntBASIC20.01■□□□□ 0.79
LINC01560Q8TB33 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01560Q8TB33 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01560Q8TB33 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20■□□□□ 0.79
LINC01560Q8TB33 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01560Q8TB33 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01560Q8TB33 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01560Q8TB33 AC105265.2-201ENST00000467189 838 ntBASIC20■□□□□ 0.79
LINC01560Q8TB33 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01560Q8TB33 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LINC01560Q8TB33 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.99■□□□□ 0.79
LINC01560Q8TB33 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01560Q8TB33 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01560Q8TB33 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01560Q8TB33 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.98■□□□□ 0.79
LINC01560Q8TB33 AC099791.2-201ENST00000605725 427 ntBASIC19.98■□□□□ 0.79
LINC01560Q8TB33 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.98■□□□□ 0.79
LINC01560Q8TB33 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.98■□□□□ 0.79
LINC01560Q8TB33 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LINC01560Q8TB33 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 AC026271.2-201ENST00000428091 497 ntBASIC19.97■□□□□ 0.79
LINC01560Q8TB33 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 AC092171.4-201ENST00000609130 632 ntBASIC19.97■□□□□ 0.79
LINC01560Q8TB33 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC01560Q8TB33 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01560Q8TB33 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01560Q8TB33 MIR4767-201ENST00000582827 78 ntBASIC19.96■□□□□ 0.79
LINC01560Q8TB33 AC092666.2-201ENST00000613287 246 ntBASIC19.96■□□□□ 0.79
LINC01560Q8TB33 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01560Q8TB33 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01560Q8TB33 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.95■□□□□ 0.79
LINC01560Q8TB33 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 AL022069.1-201ENST00000568025 1636 ntBASIC19.95■□□□□ 0.78
LINC01560Q8TB33 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 SERBP1P1-201ENST00000396021 1160 ntBASIC19.95■□□□□ 0.78
LINC01560Q8TB33 MIR939-201ENST00000401314 82 ntBASIC19.95■□□□□ 0.78
LINC01560Q8TB33 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 AP001330.3-201ENST00000520123 633 ntBASIC19.95■□□□□ 0.78
LINC01560Q8TB33 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 DUSP8P4-201ENST00000399538 1761 ntBASIC19.95■□□□□ 0.78
LINC01560Q8TB33 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.95■□□□□ 0.78
LINC01560Q8TB33 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 AC009102.2-201ENST00000606772 1639 ntBASIC19.94■□□□□ 0.78
LINC01560Q8TB33 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LINC01560Q8TB33 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LINC01560Q8TB33 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.93■□□□□ 0.78
LINC01560Q8TB33 MIR6089-201ENST00000616698 64 ntBASIC19.93■□□□□ 0.78
LINC01560Q8TB33 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01560Q8TB33 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01560Q8TB33 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.93■□□□□ 0.78
LINC01560Q8TB33 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms