Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RASGEF1AQ8N9B8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RASGEF1AQ8N9B8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.7■■□□□ 1.22
RASGEF1AQ8N9B8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.7■■□□□ 1.22
RASGEF1AQ8N9B8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RASGEF1AQ8N9B8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.69■■□□□ 1.22
RASGEF1AQ8N9B8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 LINC00543-201ENST00000567234 1845 ntBASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RASGEF1AQ8N9B8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 MTDHP2-201ENST00000601468 714 ntBASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 AC010997.5-201ENST00000609182 354 ntBASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RASGEF1AQ8N9B8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 AL161729.1-201ENST00000604104 1402 ntBASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.66■■□□□ 1.22
RASGEF1AQ8N9B8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 AC141586.4-201ENST00000624558 1573 ntBASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 KRT16P3-201ENST00000439127 1283 ntBASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 AL356441.2-201ENST00000443009 864 ntBASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 MIR6722-201ENST00000617286 78 ntBASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RASGEF1AQ8N9B8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RASGEF1AQ8N9B8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RASGEF1AQ8N9B8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RASGEF1AQ8N9B8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RASGEF1AQ8N9B8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.62■■□□□ 1.21
RASGEF1AQ8N9B8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
RASGEF1AQ8N9B8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.62■■□□□ 1.21
RASGEF1AQ8N9B8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RASGEF1AQ8N9B8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RASGEF1AQ8N9B8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RASGEF1AQ8N9B8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms