Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD1Q8N668 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD1Q8N668 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.92■□□□□ 0.62
COMMD1Q8N668 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD1Q8N668 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD1Q8N668 SPCS2P3-201ENST00000500401 656 ntBASIC18.92■□□□□ 0.62
COMMD1Q8N668 BHLHE23-202ENST00000612929 1109 ntBASIC18.92■□□□□ 0.62
COMMD1Q8N668 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COMMD1Q8N668 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD1Q8N668 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD1Q8N668 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD1Q8N668 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD1Q8N668 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.91■□□□□ 0.62
COMMD1Q8N668 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.91■□□□□ 0.62
COMMD1Q8N668 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.91■□□□□ 0.62
COMMD1Q8N668 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD1Q8N668 AL024507.2-201ENST00000606070 2574 ntBASIC18.9■□□□□ 0.62
COMMD1Q8N668 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD1Q8N668 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD1Q8N668 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COMMD1Q8N668 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD1Q8N668 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.9■□□□□ 0.62
COMMD1Q8N668 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD1Q8N668 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD1Q8N668 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD1Q8N668 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COMMD1Q8N668 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.9■□□□□ 0.62
COMMD1Q8N668 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD1Q8N668 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD1Q8N668 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 LINC00565-201ENST00000562710 2331 ntBASIC18.89■□□□□ 0.61
COMMD1Q8N668 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COMMD1Q8N668 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD1Q8N668 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COMMD1Q8N668 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD1Q8N668 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD1Q8N668 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
COMMD1Q8N668 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.88■□□□□ 0.61
COMMD1Q8N668 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD1Q8N668 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD1Q8N668 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD1Q8N668 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD1Q8N668 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COMMD1Q8N668 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD1Q8N668 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COMMD1Q8N668 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD1Q8N668 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.87■□□□□ 0.61
COMMD1Q8N668 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD1Q8N668 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
COMMD1Q8N668 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
COMMD1Q8N668 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COMMD1Q8N668 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.86■□□□□ 0.61
COMMD1Q8N668 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD1Q8N668 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD1Q8N668 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD1Q8N668 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.85■□□□□ 0.61
COMMD1Q8N668 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD1Q8N668 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD1Q8N668 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COMMD1Q8N668 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD1Q8N668 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COMMD1Q8N668 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.84■□□□□ 0.61
COMMD1Q8N668 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms