Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAM1L1Q8N609 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAM1L1Q8N609 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAM1L1Q8N609 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 AC141586.4-201ENST00000624558 1573 ntBASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 MIR6722-201ENST00000617286 78 ntBASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TRAM1L1Q8N609 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 LINC01124-201ENST00000409786 2117 ntBASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 AC010997.5-201ENST00000609182 354 ntBASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRAM1L1Q8N609 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRAM1L1Q8N609 LINC00543-201ENST00000567234 1845 ntBASIC22.82■■□□□ 1.24
TRAM1L1Q8N609 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRAM1L1Q8N609 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TRAM1L1Q8N609 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 KRT16P3-201ENST00000439127 1283 ntBASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAM1L1Q8N609 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 AL356441.2-201ENST00000443009 864 ntBASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAM1L1Q8N609 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAM1L1Q8N609 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAM1L1Q8N609 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
TRAM1L1Q8N609 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAM1L1Q8N609 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.79■■□□□ 1.24
TRAM1L1Q8N609 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.79■■□□□ 1.24
TRAM1L1Q8N609 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
TRAM1L1Q8N609 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAM1L1Q8N609 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.76■■□□□ 1.23
TRAM1L1Q8N609 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 MIR6724-1-201ENST00000616420 92 ntBASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 MIR6724-2-201ENST00000616483 92 ntBASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 MIR6724-4-201ENST00000617390 92 ntBASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 MIR6724-3-201ENST00000622482 92 ntBASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
TRAM1L1Q8N609 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.74■■□□□ 1.23
TRAM1L1Q8N609 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAM1L1Q8N609 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.74■■□□□ 1.23
TRAM1L1Q8N609 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
TRAM1L1Q8N609 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRAM1L1Q8N609 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRAM1L1Q8N609 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAM1L1Q8N609 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
TRAM1L1Q8N609 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
TRAM1L1Q8N609 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
TRAM1L1Q8N609 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAM1L1Q8N609 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms